Package: labNorm 1.0.1

labNorm: Normalize Laboratory Measurements by Age and Sex

Provides functions for normalizing standard laboratory measurements (e.g. hemoglobin, cholesterol levels) according to age and sex, based on the algorithms described in "Personalized lab test models to quantify disease potentials in healthy individuals" (Netta Mendelson Cohen, Omer Schwartzman, Ram Jaschek, Aviezer Lifshitz, Michael Hoichman, Ran Balicer, Liran I. Shlush, Gabi Barbash & Amos Tanay, <doi:10.1038/s41591-021-01468-6>). Allows users to easily obtain normalized values for standard lab results, and to visualize their distributions. See more at <https://tanaylab.weizmann.ac.il/labs/>.

Authors:Aviezer Lifshitz [aut, cre], Netta Mendelson-Cohen [aut], Weizmann Institute of Science [cph]

labNorm_1.0.1.tar.gz
labNorm_1.0.1.zip(r-4.7)labNorm_1.0.1.zip(r-4.6)labNorm_1.0.1.zip(r-4.5)
labNorm_1.0.1.tgz(r-4.6-any)labNorm_1.0.1.tgz(r-4.5-any)
labNorm_1.0.1.tar.gz(r-4.7-any)labNorm_1.0.1.tar.gz(r-4.6-any)
labNorm_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
labNorm/json (API)

# Install 'labNorm' in R:
install.packages('labNorm', repos = c('https://aviezerl.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.70 score 7 scripts 282 downloads 10 exports 29 dependencies

Last updated from:5fd2bcd9ac. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE419
source / vignettesOK189
linux-release-x86_64NOTE184
macos-release-arm64NOTE177
macos-oldrel-arm64NOTE253
windows-develNOTE198
windows-releaseNOTE190
windows-oldrelNOTE413
wasm-releaseOK112

Exports:ln_convert_unitsln_data_downloadedln_download_dataln_lab_default_unitsln_lab_unitsln_normalizeln_normalize_multiln_patients_quantile_valueln_plot_distln_quantile_value

Dependencies:clicpp11dplyrfarverforcatsgenericsggplot2gluegtableisobandlabelinglifecyclemagrittrpillarpkgconfigpurrrR6rappdirsRColorBrewerrlangS7scalestibbletidyselectutf8vctrsviridisLitewithryesno

Readme and manuals

Help Manual

Help pageTopics
Example values of Hemoglobin and Creatininecreatinine_data hemoglobin_data
Available lab namesLAB_DETAILS
Convert values to the default units for the labln_convert_units
Download high-resolution reference distributionsln_data_downloaded ln_download_data
Get available units for a labln_lab_default_units ln_lab_units
Normalize lab values to age and sexln_normalize ln_normalize_multi
Plot age-sex distribution of a labln_plot_dist
Compute the lab value for a given quantileln_patients_quantile_value ln_quantile_value